Form 1099-SA Checklist: 2015 Tax Year
HSA, Archer MSA, and Medicare Advantage MSA Distributions
Purpose and Overview
Form 1099-SA reports distributions made during the 2015 calendar year from Health Savings Accounts (HSAs), Archer Medical Savings Accounts (Archer MSAs), and Medicare Advantage MSAs. Trustees and custodians must furnish statements to recipients and file information returns with the Internal Revenue Service to support accurate reporting of medical savings account distributions.
Recipients use Form 1099-SA to complete Form 8889 (HSA distributions) or Form 8853 (Archer MSA and Medicare Advantage MSA distributions) when filing Form 1040. Proper reporting determines whether distributions are tax-free qualified medical expenses or taxable income.
2015 Filing Deadlines
- Copy B to recipients: February 1, 2016
- Copy A to IRS (paper filing): February 29, 2016
- Copy A to IRS (electronic filing): March 31, 2016
Filing Checklist for 2015
1. Verify Identification Numbers and Account Information
Confirm that all Forms 1099-SA include accurate taxpayer identification numbers for both the trustee or payer and the account holder. The payer’s federal identification number and the recipient’s identification number must be complete and correct on Copy A filed with the IRS.
If multiple accounts exist for the same recipient and more than one Form 1099-SA is issued, complete the account number field to distinguish each account. The account number should match internal records for the 2015 tax year.
2. Report Gross Distribution Amount (Box 1)
Enter the total gross distribution amount in Box 1. This amount includes all distributions made during calendar year 2015, whether paid directly to medical service providers or distributed to the account holder.
Do not reduce the gross distribution for qualified medical expenses. The trustee does not determine taxability. Distributions made using an HSA debit card or through authorized third parties must also be included. Trustee-to-trustee transfers between accounts of the same type are not considered distributions and therefore do not require reporting.
3. Report Earnings on Excess Contributions (Box 2)
Complete Box 2 only if excess HSA or Archer MSA contributions plus earnings were withdrawn by the due date of the recipient’s 2015 tax return, including extensions.
Earnings reported in Box 2 must also be included in the total for Box 1. Box 2 provides informational details that help recipients identify taxable earnings. Medicare Advantage MSAs do not use Box 2.
4. Enter Distribution Code (Box 3)
Select the correct distribution code for 2015:
- Code 1 – Normal distribution
- Code 2 – Excess contributions withdrawn (HSA or Archer MSA only)
- Code 3 – Disability distribution
- Code 4 – Death distribution other than Code 6
- Code 5 – Prohibited transaction
- Code 6 – Death distribution after year of death to nonspouse beneficiary
Only one distribution code may be used per Form 1099-SA.
5. Report Fair Market Value for Death Distributions (Box 4)
If the account holder died during 2015, enter the fair market value of the account as of the date of death in Box 4.
For non-spouse beneficiaries, the account ceases to be an HSA or MSA on the date of the beneficiary's death. The fair market value becomes taxable income in the year of death. If distributions occur after the year of death, reduce Box 4 by qualified medical expenses of the decedent paid within one year after death.
If the surviving spouse is the designated beneficiary, the spouse becomes the account holder, and the account retains its tax-favored status.
6. Identify Account Type (Box 5)
Check the appropriate box to indicate whether the distribution came from an HSA, Archer MSA, or Medicare Advantage MSA. This determines whether the recipient files Form 8889 or Form 8853. A separate Form 1099-SA must be issued for each account type.
7. Apply Spouse Beneficiary Rules
When a spouse inherits an HSA in 2015, the spouse becomes the account holder and may continue to use the account for qualified medical expenses and make future contributions.
When a spouse inherits an Archer MSA or Medicare Advantage MSA, the account is treated as an Archer MSA of the spouse for reporting purposes. No immediate income inclusion applies.
8. Furnish Recipient Copies and File With the IRS
Provide Copy B to recipients by February 1, 2016. File Copy A with the IRS by February 29, 2016, for paper filing, or March 31, 2016, if filing electronically using Publication 1220-compliant software.
Attach Form 1096 when filing paper returns. Do not submit Form 1096 with electronic filings.
2015 Regulatory Guidance and Special Situations
Recipient Filing Requirements
Recipients must file Form 8889 or Form 8853 with Form 1040 if they:
- Received distributions during 2015
- Made or received contributions for 2015
- Acquired an interest in an account due to the account holder’s death
- Failed eligibility testing requirements
If none of these conditions apply, filing may not be required.
Mistaken Distribution Repayment Rules
Mistaken HSA distributions may be repaid by April 15 following the year the recipient knew or should have known the distribution was a mistake. When properly repaid, the amount is not taxable, not subject to the additional 20% tax, and not treated as a contribution. Repayments are not reported on Form 5498-SA.
Excess Contribution Treatment
If excess contributions and earnings are withdrawn by the tax return due date:
- Earnings are taxable and reported as income
- The excess contribution avoids the 6% excise tax
If excess contributions remain in the account:
- A 6% annual excise tax applies
- The tax is reported on Form 5329 for each year the excess remains
Box 2 Reporting Clarification
Earnings reported in Box 2 are already included in Box 1. Do not double-report amounts. Box 2 exists solely to identify taxable earnings associated with excess contributions.
Compliance and Recordkeeping
Maintain records supporting all 2015 distributions, including documentation of medical expenses, repayments, excess contribution corrections, and beneficiary determinations. Retain copies of issued Forms 1099-SA and related documentation in accordance with IRS record retention requirements. Issue corrected forms promptly if errors are discovered.
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This checklist is for educational purposes only and does not constitute tax or legal advice. Always review official IRS instructions and consult a qualified professional for guidance.

